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Cancer Genomics Glossary

100 terms total — 24 showing — Last updated 15 Sep 2026

FFPE FFPE

Intermediate Technical IVT

Formalin-fixed, paraffin-embedded tissue samples commonly used for histopathological examination and molecular analysis.

Showing 25–48 of 100

CPS

Intermediate Technical IVT

Combined Positive Score, a PD-L1 scoring method including both tumor and immune cell expression.

Technical Term Full entry →

ctDNA

Advanced Technical IVT

Cell-free tumor DNA fragments circulating in the bloodstream that can be analyzed for cancer monitoring and diagnosis.

Abbreviation Full entry →

dMMR

Intermediate Technical IVT

Deficient Mismatch Repair, indicating loss of function in DNA mismatch repair proteins.

Technical Term Full entry →

epistatic interaction

Advanced Technical IVT

The phenomenon where the effect of one genetic variant is modified or masked by the presence of variants in other genes...

Technical Term Full entry →

exome capture

Intermediate Technical IVT

A targeted enrichment technique that selectively isolates protein-coding sequences (exons) from genomic DNA prior to seq...

Technical Term Full entry →

FFPE

Intermediate Technical IVT

Formalin-fixed, paraffin-embedded tissue samples commonly used for histopathological examination and molecular analysis.

Abbreviation Full entry →

FISH

Intermediate Technical IVT

Fluorescence In Situ Hybridization, a molecular technique detecting specific DNA sequences in tissue samples.

Technical Term Full entry →

fusion transcript

Intermediate Technical IVT

An abnormal RNA molecule created when two normally separate genes are joined due to chromosomal rearrangement.

Technical Term Full entry →

genomic biomarker validation

Advanced Technical IVT

Systematic process of demonstrating that a genomic alteration reliably predicts clinical outcomes or treatment responses...

Technical Term Full entry →

genomic instability

Intermediate Technical IVT

A hallmark of cancer characterized by increased frequency of mutations and chromosomal aberrations throughout the genome...

Technical Term Full entry →

genomic scar signature

Advanced Technical IVT

Patterns of chromosomal alterations that provide evidence of past DNA repair deficiencies, particularly homologous recom...

Technical Term Full entry →

germline mutation

Intermediate Technical IVT

An inherited genetic alteration present in reproductive cells and therefore passed from parent to offspring.

Technical Term Full entry →

Impaired ability to repair DNA double-strand breaks through the homologous recombination pathway, creating therapeutic v...

Technical Term Full entry →

hotspot mutation

Intermediate Technical IVT

Genetic alteration occurring at a genomic position with high mutation frequency across multiple cancer samples.

Technical Term Full entry →

HRD

Advanced Technical IVT

Homologous Recombination Deficiency, a genomic instability pattern predictive of PARP inhibitor response.

Technical Term Full entry →

immunogenomics

Advanced Technical IVT

The study of how genomic variations affect immune system function and response to cancer immunotherapy.

Technical Term Full entry →

immunohistochemistry

Intermediate Technical IVT

Laboratory technique using antibodies to detect specific proteins in tissue sections for cancer diagnosis and biomarker...

IHC
Technical Term Full entry →

kataegis

Advanced Technical IVT

A localized hypermutation phenomenon characterized by clusters of C-to-T and C-to-G mutations occurring in close proximi...

Technical Term Full entry →

liquid biopsy

Intermediate Technical IVT

A non-invasive diagnostic technique that analyzes circulating tumor DNA or other cancer biomarkers in blood samples.

Technical Term Full entry →

loss of heterozygosity

Intermediate Technical IVT

A genomic event where one allele is deleted or altered, leaving only one functional copy of a gene.

Technical Term Full entry →

microsatellite instability

Advanced Technical IVT

A molecular phenotype resulting from defective DNA mismatch repair, characterized by length variations in repetitive DNA...

MSI
Technical Term Full entry →

microsatellite stable

Intermediate Technical IVT

Cancer classification indicating normal DNA mismatch repair function and intact microsatellite sequences.

MSS
Technical Term Full entry →

minimal residual disease

Intermediate Technical IVT

Small numbers of cancer cells that remain after treatment but are below the detection limit of conventional imaging or c...

Technical Term Full entry →

mismatch repair deficiency

Advanced Technical IVT

A cellular condition where DNA mismatch repair mechanisms are impaired, leading to accumulation of mutations.

Technical Term Full entry →
Showing 25–48 of 100

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